BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037A02LP1|AL430320
(906 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1462 1707 0.0
>3x_Contig1462
Length = 8247
Score = 1707 bits (844), Expect = 0.0
Identities = 877/906 (96%)
Strand = Plus / Plus
Query: 1 gatctcgaagctatcggaggcaccgaaagagatgggttaatgcttacgcggttttccttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2596 gatctcgaagctatcggaggcaccgaaagagatgggttaatgcttacgcggttttccttg 2655
Query: 61 atggggatcgttttctgtcatttgttactcaacgacaaaacaaaattggttccctttgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2656 atggggatcgttttctgtcatttgttactcaacgacaaaacaaaattggttccctttgaa 2715
Query: 121 cttgagccaatcaaagtcttggaggccgacgaattagtggttttattacaagaactatac 180
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2716 cttgagcaaatcaaagtcttggaggccgacgaattagtggttttattacaagaactatac 2775
Query: 181 caatgttggctcgatatggatatctacgcyttagaacagtgtctatyacagcyagaggat 240
||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||
Sbjct: 2776 caatgttggctcgatatggatatctacgctttagaacagtgtctattacagctagaggat 2835
Query: 241 ttcyattctccctggtacaacgtcatgatagamaamatcatcgcattatgccaatcgaat 300
||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 2836 ttctattctccctggtacaacgtcatgatagaaaaaatcatcgcattatgccaatcgaat 2895
Query: 301 aaacyatggaagcggatagcccccacttactcatgcmttgcacttcaagatcyaatggct 360
|||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||
Sbjct: 2896 aaactatggaagcggatagcccccacttactcatgcattgcacttcaagatctaatggct 2955
Query: 361 aaatyagaaacgggcaacacgataacmatgaatagggaccaactacyaacgcyattgatg 420
|||| ||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||
Sbjct: 2956 aaattagaaacgggcaacacgataacaatgaatagggaccaactactaacgctattgatg 3015
Query: 421 amaagtatagcaaaggacacggctgacgtgtatcacmaacyagatttagtggaagactac 480
| ||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||
Sbjct: 3016 aaaagtatagcaaaggacacggctgacgtgtattacaaactagatttagtggaagactac 3075
Query: 481 gtttatytcggtgaagagtacttcgttcctctgagatccgaagaactcaacatcgtgaac 540
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3076 gtttatttcggtgaagagtacttcgttcctctgagatccgaagaactcaacatcgtgaac 3135
Query: 541 ccattgtctcaacamatgggctcagamatcattgggaaasacgaatggttgtgcmatgtt 600
|||||||||||||| ||||||||||| |||||||||||| |||||||||||||| |||||
Sbjct: 3136 ccattgtctcaacaaatgggctcagaaatcattgggaaagacgaatggttgtgcaatgtt 3195
Query: 601 tccmattggcataaaccaaaagtaccgaagamattgagcgctatagamttcatggactac 660
||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 3196 tccaattggcataaaccaaaagtaccgaagaaattgagcgctatagaattcatggactac 3255
Query: 661 atgamagcmgccagagtgaccatctctcaaacgaatctagcccatcacgaacccacagta 720
|||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3256 atgaaagcagccagagtgaccatctctcaaacgaatctagcccatcacgaacccacagta 3315
Query: 721 acttcttttcttttgamactttctacaatcactcatgcacaattgactcagaactcatcg 780
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3316 acttcttttcttttgaaactttctacaatcactcatgcacaattgactcagaactcatcg 3375
Query: 781 tcccttgcatccacaaattaacctaactaaatcattattacttcatgcaaacgtggagaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3376 tcccttgcatccacaaattaacctaactaaatcattattacttcatgcaaacgtggagaa 3435
Query: 841 gaaggcaattcgccaaatattgtcaatcaaacgaacaaaaaatcgtttagataattatca 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3436 gaaggcaattcgccaaatattgtcaatcaaacgaacaaaaaatcgtttagataattatca 3495
Query: 901 acgcta 906
||||||
Sbjct: 3496 acgcta 3501
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.715 1.33
Gapped
Lambda K H
1.40 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4357
Number of Sequences: 1807
Number of extensions: 4357
Number of successful extensions: 74
Number of sequences better than 1.0e-20: 1
length of query: 906
length of database: 10,358,551
effective HSP length: 16
effective length of query: 890
effective length of database: 10,329,639
effective search space: 9193378710
effective search space used: 9193378710
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.3 bits)
S1: 12 (24.8 bits)
S2: 49 (99.6 bits)